Table 2 Cancer samples based on Illumina Infinium 450k metyhlation platform
Cancer name | TCGA project | Number of samples | Number of malignant samples | Cancer type |
|---|---|---|---|---|
Breast | TCGA-BRCA | 596 | 499 | Breast invasive carcinoma |
Colon | TCGA-COAD | 344 | 307 | Colon adenocarcinoma |
Kidney | TCGA-KIRC | 439 | 319 | Kidney renal clear cell carcinoma |
Liver | TCGA-LIHC | 258 | 209 | Liver hepatocellular carcinoma |
Lung | TCGA-LUSC | 291 | 249 | Lung squamous cell carcinoma |
Prostate | TCGA-PRAD | 399 | 349 | Prostate adenocarcinoma |
Thyroid | TCGA-THCA | 454 | 398 | Thyroid carcinoma |