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Table 4 Top 4 cell markers for MSC-fib in mouse stromal cells and ARI value after clustering the cells with the selected markers

From: Detection of cell markers from single cell RNA-seq with sc2marker

Methods

Top1

Top2

Top3

Top4

ARI

sc2marker

Vcam1

Pdgfrb

Pdgfra

Cd63

0.1882297

MAST

Aplp1

Cldn11

Vcam1

Apod

0.1830788

LR

Vcam1

Pdgfrb

Aplp1

Cryab

0.1697615

Wilcox

Vcam1

Pdgfrb

Prnp

Pdgfra

0.1685325

ROC

Vcam1

Pdgfrb

Pdgfra

Prnp

0.1674651

Hypergate

Vcam1

Pdgfrb

Pdgfra

Lamp1

0.1491762

RankCorr

Pdgfra

Pdgfrb

Prnp

Aplp1

0.1436412

T

Vcam1

Pdgfrb

Aplp1

Cryab

0.1367963

CombiROC

Itgb4

Vcam1

Ly9

Il2rg

0.1296453

Comet

Vcam1

Pdgfrb

Il1r1

Pdgfra

0.1259644

  1. Bold indicate validated markers. Methods are sorted by decreasing ARI