Table 2 Quality thresholds used in simulation analysis
Caller | CNV size (exons) | Quality threshold |
|---|---|---|
1 | 0.95 | |
Cobalt | 3 | 0.95 |
10 | 0.96 | |
1 | 5 | |
XHMM | 3 | 10 |
10 | 8 | |
1 | − 6.4 | |
ExomeDepth | 3 | 64 |
10 | 12 | |
1 | 0 | |
Convading | 3 | 0 |
10 | 0.3 | |
1 | 0.85 | |
Clamms | 3 | 0.95 |
10 | 0.93 | |
Conifer | 1–10 | NA |
1 | 0.52 | |
Codex | 3 | 30 |
10 | 118 |