Integration of probabilistic functional networks without an external Gold Standard

Table 2 Network topology. Network statistics for the low throughput (LTP_GS), BioSystems (MP_GS) and Gene Ontology (BP10_GS and BP100_GS) scored networks. [31]

	LTP_GS	MP_GS	BP10_GS	BP100_GS
Proteins	5960	5919	5960	5958
Interactions	501,299	458,778	498,385	495,007
Average degree	168	155	167	166
Connected components	1	1	1	1
Diameter	4	5	4	4
Characteristic path length	2.07	2.15	2.07	2.07
Centralization	0.57	0.33	0.58	0.57
Correlation Power law	0.41	0.46	0.41	0.43
\(R^{2}\) Power law	0.74	0.75	0.74	0.74
Clusters	87	220	31	169

Statistics were calculated using the Cytoscape NetworkAnalyser [33] plugin and clustering was carried out using the Markov Clustering Algorithm (MCL)