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Table 4 The enrichment results of the four algorithms in the four real datasets

From: A binary biclustering algorithm based on the adjacency difference matrix for gene expression data analysis

Dataset Method Ratio Count BP CC MF
Term (P-value) Term (P-value) Term (P-value)
Pollen AMBB 0.7629 621/814 cytoplasmic translation (1.10E-65) Cytoplasm (3.00E-74) structural constituent of ribosome
(3.10E-49)
Bimax 0.75 108/144 integrin-mediated signaling pathway (1.50E-05) Membrane (1.00E-07) ATP binding (1.50E-15)
Plaid 0.9444 34/36 cellular lipid metabolic process (1.60E-06) Membrane (1.30E-06) ATPase activity, coupled to transmembrane movement of substances (3.70E-18)
QUBIC 0.8378 124/148 acyl-CoA metabolic process (9.40E-15) mitochondrial matrix (1.30E-07) metalloendopeptidase activity (1.10E-18)
Buettner AMBB 0.7358 518/704 cell division (1.70E-28) Nucleoplasm (6.70E-76) RNA binding (2.40E-60)
Bimax 0.6222 28/45 Ossification (1.50E-04) Nucleus (2.00E-04) transmembrane transporter activity (9.50E-03)
Plaid 0.4848 16/33 Ossification (4.90E-03) Nucleus (1.90E-03) nucleotidyltransferase activity (3.00E-02)
QUBIC 0.7321 46/51 negative regulation of apoptotic process (2.70E-03) cytoplasmic vesicle (1.50E-03) double-stranded RNA binding (8.00E-03)
GDS3715 AMBB 0.735 294/400 cytoplasmic translation (9.60E-21) Cytosol (3.70E-28) protein binding (1.00E-25)
Bimax 0.7769 94/121 inorganic anion transport (2.10E-08) Membrane (3.40E-07) ATPase activity, coupled to transmembrane movement of substances (9.10E-22)
Plaid 0.7736 41/53 transmembrane transport (8.60E-11) ATP-binding cassette (ABC) transporter complex (1.50E-05) ATPase activity, coupled to transmembrane movement of substances (9.70E-16)
QUBIC 0.8088 55/68 transmembrane transport (2.20E-11) ATP-binding cassette (ABC) transporter complex (2.25E-05) ATPase activity, coupled to transmembrane movement of substances (5.90E-17)
GSE3904 AMBB 0.8723 41/47 structural constituent of ribosome (1.70E-38) cytosolic ribosome (8.40E-46) structural constituent of ribosome (1.70E-38)
Bimax 0.9474 54/57 transmembrane transport (2.60E-13) intracellular membrane-bounded organelle (3.00E-04) ATPase activity, coupled to transmembrane movement of substances (7.50E-25)
Plaid 0.9091 30/33 transmembrane transport (8.20E-22) integral component of membrane (1.40E-05) ATPase activity, coupled to transmembrane movement of substances (8.70E-29)
QUBIC 0.828 77/93 transmembrane transport (2.10E-33) integral component of membrane (1.60E-07) ATPase activity, coupled to transmembrane movement of substances (1.50E-44)