From: Cogito: automated and generic comparison of annotated genomic intervals
Base technology | ||||||
---|---|---|---|---|---|---|
mRNA | ChIP | ChIP | ChIP | ChIP | RRBS | |
H3K4me1 | H3K4me3 | H3K27ac | H3K27me3 | |||
Condition | ||||||
J1 | 1 | 1 | 1 | 1 | 2 | 2 |
TKO | 1 | 1 | 1 | 1 | 2 | 2 |
TKO3a1 | 2 | 1 | 2 | 1 | 2 | |
TKO3a2 | 2 | 1 | 1 | 2 | 1 | 2 |
TKO3b1 | 1 | 1 | 1 | 1 | 1 | 2 |
DKO | 1 | 1 | 2 | 1 | 1 | |
DKO3a1 | 1 | 1 | 1 | 1 | 1 | |
DKO3a2 | 1 | 1 | 1 | 1 | 1 | |
DKO3b1 | 1 | 1 | 1 | 1 | 1 |