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Table 2 Parameter settings of the methods

From: A novel hybrid framework for metabolic pathways prediction based on the graph attention network

Methods

Parameter settings

SVM

Gaussian kernel

kNN

k=5

NB

Multinomial NB; Laplace smoothing (\(\alpha\)=1)

DT

Gini impurity; Minimal samples=2

RF

Trees=300; Gini impurity; Depth=60

GCN*

Same as  [16]

HFGAT

d=70; m=2; batch=10; iteration=100

  1. \(^*\)GCN represents GCN+global features in [16]