Table 2 Information about GBM RNA-seq datasets used for integrated analysis using different p-value combination methods in our study
From: Fused inverse-normal method for integrated differential expression analysis of RNA-seq data
Datasets | No. of replicates (cases/normal) | No. of genes (after filtering) | Up DEGs | Down DEGs |
|---|---|---|---|---|
GSE123892 | 4/3 | 15,024 | 1914 | 1837 |
GSE151352 | 12/12 | 12,916 | 670 | 1545 |
TCGA-GBM | 160/5 | 17,943 | 3746 | 3183 |