Fig. 8
From: SCONCE2: jointly inferring single cell copy number profiles and tumor evolutionary distances
Robinson–Foulds (RF) distances between true and inferred phylogenies. Phylogenies were estimated using neighbor-joining on \(t_2+t_3\) estimates, and on the Euclidean, cnp2cnp, and MEDICC distances between true CNPs and CNPs inferred from SCONCE. Methods are shown along the x-axis, while Robinson–Foulds distances are shown on the y-axis. Across multiple parameter sets (panels A–D correspond to trees A–D), using \(t_2+t_3\) estimates resulted in a lower Robinson–Foulds distance from the simulated tree, relative to all other inferred phylogenies