Table 1 Empirical biological knowledge estimation
From: Using empirical biological knowledge to infer regulatory networks from multi-omics data
Edge | Operation | Frequency | Candidate | Acceptance |
|---|---|---|---|---|
\(G_i\) \(G_j\) | Add | \(f_{ij} = f_{ij} + 1\) | Accepted | \(a_{ij} = a_{ij} + 1\) |
Rejected | \(a_{ij} = a_{ij}\) | |||
\(G_i\) \(G_j\) | Delete | \(f_{ij} = f_{ij} + 1\) | Accepted | \(a_{ij} = a_{ij}\) |
Rejected | \(a_{ij} = a_{ij} + 1\) | |||
\(G_i\) \(G_j\) | Reverse | \(f_{ij} = f_{ij} + 1\) | Accepted | \(a_{ij} = a_{ij}\) |
\(a_{ji} = a_{ji} + 1\) | ||||
\(f_{ji} = f_{ji} + 1\) | Rejected | \(a_{ij} = a_{ij} + 1\) | ||
\(a_{ji} = a_{ji}\) |