Table 3 Estimated powers of the seven methods under sparse case where PVE = 0.3%, and prop = 5%, 20% or 50% of SNPs were randomly selected to be causal with the same direction of effect sizes
Prop | BT | SKATO | SKAT | Simes | minP | HMP | ACAT |
|---|---|---|---|---|---|---|---|
0.05 | 0.350 | 0.065 | 0.059 | 0.044 | 0.037 | 0.054 | 0.054 |
0.20 | 0.379 | 0.058 | 0.062 | 0.039 | 0.035 | 0.051 | 0.051 |
0.50 | 0.363 | 0.066 | 0.058 | 0.038 | 0.038 | 0.047 | 0.047 |