Fig. 6
From: Assignment of structural domains in proteins using diffusion kernels on graphs
KluDo’s performance in the case of assuming all structures as multi-domain over the multi-domain structures of ASTRAL40. From the ASTRAL40 dataset, 2208 chains that were recognized as multi-domain by both SCOP and CATH were considered. The accuracy (as the percent of true decompositions) for each combination of the four kernels (LED, MD, MED and RL) and two clustering algorithms (kernel k-means and spectral clustering denoted by KK and SP, respectively) is presented. The accuracies are based on the OL and ARI scores with the thresholds of 85% and 50%, respectively (see Additional file 3)