Fig. 8
From: Assignment of structural domains in proteins using diffusion kernels on graphs
KluDo’s performance based on the number of domains over ASTRAL40. For each of the four diffusion kernels alongside spectral clustering, the plots A to D show the percent of the correct assignments (the cases of compliance with SCOP or CATH based on the OL score using an 85% threshold), overcuts (the cases of assigning a higher number of domains than both SCOP and CATH), undercuts (the cases of fewer domains than both SCOP and CATH), boundary inconsistencies (the cases of incorrect assignment where the number of domains complies with SCOP or CATH) and other cases, over the 1- to 4-domain subsets (based on SCOP) of ASTRAL40. CA, OC, UC, and BI represent correct assignments, overcuts, undercuts and boundary inconsistencies, respectively (see Additional file 7)