Pattern matching for high precision detection of LINE-1s in human genomes

BMC Bioinformatics

Table 1 F1 Scores of L1PD outputs for different values of parameters m, t, and \(\delta\)

\(\delta\)	t	m	Precision	Recall	F1 score
5	650	7	0.74503	0.55979	0.63926
	675	7	0.74481	0.56001	0.63932
	700	7	0.74465	0.56016	0.63935
	725	7	0.74445	0.56023	0.63932
	750	7	0.74414	0.56038	0.63931
10	625	9	0.79454	0.58554	0.6742
	650	9	0.79409	0.58591	0.67429
	675	9	0.7937	0.5862	0.67434
	700	9	0.79321	0.58642	0.67431
	725	9	0.7925	0.58642	0.67405
15	650	9	0.79167	0.58956	0.67582
	675	9	0.7912	0.58986	0.67585
	700	9	0.7908	0.59008	0.67585
	725	9	0.78995	0.59008	0.67553
	750	9	0.78937	0.59022	0.67541
20	650	9	0.7894	0.59417	0.678
	675	9	0.78893	0.59468	0.67816
	700	9	0.78856	0.59498	0.67822
	725	9	0.78774	0.59505	0.67796
	750	9	0.78717	0.5952	0.67785
25	650	9	0.78842	0.59395	0.6775
	675	9	0.78788	0.59447	0.67764
	700	9	0.78745	0.59483	0.67771
	725	9	0.78663	0.5949	0.67745
	750	9	0.78606	0.59505	0.67734
30	650	9	0.78819	0.59366	0.67722
	675	9	0.78764	0.59417	0.67735
	700	9	0.78721	0.59454	0.67743
	725	9	0.78639	0.59461	0.67718
	750	9	0.78587	0.5949	0.67717

ISSN: 1471-2105