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Table 2 Modules in the ‘hypoxia GO set’ show higher interconnectivity than expected by chance

From: SUBATOMIC: a SUbgraph BAsed mulTi-OMIcs clustering framework to analyze integrated multi-edge networks

Edge type

Hypoxia GO set

Random mean

Random std

Confidence down

Confidence up

Fold Change

M-type

490

22

24

21

24

21

R-type

27,476

1425

780

1377

1474

19

H-type

428

17

85

12

23

19

C-type

2772

202

216

189

216

13

P-type

872

52

70

48

57

15

Total

32,038

1720

880

1665

1774

18

  1. We calculated mean, standard deviation and a 95% confidence interval based on a distribution of 1000 randomly sampled sets of modules. Confidence up = upper boundary of the confidence interval, Confidence down = lower boundary of the confidence interval, Fold change = comparison of the number of superview interactions in the ‘hypoxia GO set’ with the upper boundary of the random distribution. We observed a high fold change for all edge types in the ‘hypoxia GO set’