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Table 6 Ablation study on the pooling operation in the readout stage of ABCD-GGNN for ADMET prediction

From: Topology-enhanced molecular graph representation for anti-breast cancer drug selection

Pooling operation

MN

HOB

hERG

CYP3A4

Caco-2

Average pooling

0.9173

0.8586

0.8840

0.9329

0.8751

Max pooling

0.9086

0.8514

0.8792

0.9245

0.8684

Fusion

0.9255

0.8637

0.8914

0.9474

0.8828

  1. We run all models 10 times and report the mean test precision