From: Accounting for overlapping annotations in genomic prediction models of complex traits
Annotation scenario | None | A (2 annot.) | B (4 annot.) | C (4 annot.) | D (9 annot.) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
h2 | klarge (%) | R | RC | RC\(\pi\) | RC+ | RC | RC\(\pi\) | RC+ | RC | RC\(\pi\) | RC+ | RC | RC\(\pi\) | RC+ |
0.2 | 1 | 10286 | 501 | 479 | 342 | 652 | 617 | 433 | 4930 | 4446 | 4212 | 1268 | 1112 | 322 |
2.5 | 2991 | 140 | 120 | 91 | 188 | 167 | 110 | 1577 | 1933 | 1755 | 340 | 303 | 93 | |
5 | 597 | 21 | 19 | 14 | 29 | 25 | 18 | 392 | 361 | 425 | 44 | 41 | 16 | |
0.5 | 1 | 2711 | 162 | 140 | 88 | 194 | 152 | 102 | 1482 | 1303 | 1436 | 365 | 261 | 102 |
2.5 | 127 | 12 | 11 | 8 | 21 | 12 | 10 | 73 | 74 | 104 | 23 | 20 | 10 | |
5 | 4 | 3 | 3 | 3 | 3 | 3 | 3 | 4 | 26 | 55 | 3 | 3 | 3 |