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Table 1 Default values of hyper-parameters of CMIC.

From: CMIC: predicting DNA methylation inheritance of CpG islands with embedding vectors of variable-length k-mers

Symbol

Default value

Description

N

1000

Number of variable-length k-mer sequences generated from a CGI sequence

D

20

Embedding vector dimension

H

256

Hidden variable dimension

e

2

Epoch

r

0.0001

Learning rate

b

32

Batch size

d

0.5

Dropout rate

\(\alpha\)

0.01

Weight decay rate

  1. These values are used without explicit mention of the parameters