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Table 2 P-values by permutation and bootstrapping test based on 500 randomizations each

From: Filtering ASVs/OTUs via mutual information-based microbiome network analysis

Percentage of taxa removal

p-value by permutation

p-value by bootstrapping

0.01–0.06

1.000

0.508

0.06–0.11

1.000

0.514

0.11–0.16

1.000

0.503

0.16–0.21

1.000

0.491

0.21–0.26

1.000

0.511

0.26–0.31

1.000

0.575

0.31–0.36

1.000

0.644

0.36–0.41

1.000

0.525

0.41–0.46

0.999

0.601

0.46–0.51

1.000

0.663

0.51–0.56

1.000

0.507

0.56–0.61

0.996

0.585

0.61–0.66

0.994

0.666

0.66–0.71

0.997

0.534

0.71–0.76

0.445

0.722

0.76–0.81

0.994

0.753

0.81–0.86

0.314

0.813

0.86–0.91

\(\mathbf {<0.002}\)

\(\mathbf {<0.002}\)

0.91–0.96

\(\mathbf {<0.002}\)

\(\mathbf {<0.002}\)

  1. Bold values indicate levels of filtering that significantly altered the MI network