From: Detecting protein complexes with multiple properties by an adaptive harmony search algorithm
ID | Parameters | Abbreviation | Parameter value range and setting |
---|---|---|---|
1 | Harmony memory | HMs | 30 |
2 | Harmony memory considering rate | HMCR | \(HMCR_{max}= 0.95\),\(HMCR_{min} = 0.7\) |
3 | Pitch adjusting rate | PAR | \(PAR_{max}= 0.5,PAR_{min} = 0.1\) |
4 | Fret width | FW | \(FW_{max} = 0.1,FW_{min} = 0.01\) |
5 | The maximum number of iterations | Maxiter | 300 |
6 | Gene co-expression threshold | GCE | \(GCE_{min} = 0.6,GCE_{max} = 0.9\) |
7 | The inflate of MCL | Inflate | \(inflate_{min} = 0.5,inflate_{max} = 4.0\) |
8 | The ratio of initial seeds | Ratio | \(ratio_{min} = 0.5,ratio_{max} = 0.9\) |