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Table 4 In the table, \(\#R_{UDEGs}Ext\) indicates the number of up regulated genes for each gene for it which was possible to obtain a mapping and subsequent extension in IID network

From: A statistical network pre-processing method to improve relevance and significance of gene lists in microarray gene expression studies

Dataset name

\(\#R{UDEGs}Ext\)

\(\#R{DDEGs}Ext\)

\(BS_{UDEGs}\)

\(BS_{DDEGs}\)

\(\%BS_{UDEGs}\)

\(\%BS_{DDEGs}\)

GSE1297

2119

1047

37

11

0.0175

0.0105

GSE9476

10,132

11,908

331

360

0.0327

0.0302

GSE24739

4785

5939

77

115

0.0161

0.0194

GSE5281

9113

7013

118

197

0.0129

0.0281

GSE16759

1091

64

9

2

0.0082

0.0313

GSE14924

11,429

4473

368

133

0.0322

0.0297

  1. \(\#R_{DDEGs}Ext\) represents the down regulated genes for each gene for which it was possible to obtain a mapping and subsequent extension in IID network. \(BS_{DDEGs}\) indicates the percentage of detected relevant gene with respect to the total number of available genes in each data set
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BMC Bioinformatics

ISSN: 1471-2105

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