Table 8 The first 10 enriched pathways using all genes obtained from GEO2R enclosed in the AML GSE24739 data set, without using the proposed pre-processing method
PathwayName | Pvalue | FDRC | BonfC | \(|lg_{2}(P_{value})|\) | \(|lg_{2}(FDR(P_{value})|\) | \(|lg_{2}Bonf(P_{value})|\) |
|---|---|---|---|---|---|---|
(1) Signaling pathways | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(2) Generic transcription pathway | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(3) Gene expression (transcription) | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(4) SLC-mediated transmembrane transport | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(5) Cellular responses to stimuli | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(6) Cellular responses to stress | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(7) Cellular senescence | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(8) DNA damage-telomere stress induced senescence | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(9) Carbohydrate metabolism | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |
(10) Metabolism | 7.67E−303 | 3.01E−301 | 1.92E−299 | 1003.606 | 998.313 | 992.313 |