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Table 4 CPU time of APA-Scan, DaPars and APAtrap on two MEFs samples (WT vs Tsc1−/−)

From: APA-Scan: detection and visualization of 3′-UTR alternative polyadenylation with RNA-seq and 3′-end-seq data

APA-Scan

DaPars

APAtrap

48 min

21 h

36 min