From: SVAT: Secure outsourcing of variant annotation and genotype aggregation
Annotation vector step | Time (Sec) | Peak memory usage (GB) | Disk space (GB) |
---|---|---|---|
1. Region extraction | 22.85 | 0.26 | 0.052 |
2. Region separation | 4.49 | 0.29 | Â |
3. Variant enumeration | 99.75 | 6.58 | 6.98 |
4. Enumerated variant annotation | 66,558.10 | 357.28 | 34.23 |
5. Vectorization | 3401.69 | 2.79 | 2.49 |