Skip to main content

Table 4 Resource requirements of the variant annotation

From: SVAT: Secure outsourcing of variant annotation and genotype aggregation

Secure annotation step

Site (client/server)

Time (Sec)

Peak memory usage (GB)

Disk space (GB)

1. Separate VCF

Client

120.79

0.001

0.50

2. Vectorization

Client

238.67

0.69

0.17

3. Encoding and Encryption

Client

34.44

58.03

22.45

4. Secure annotation

Server

26.46

108.13

22.45

5. Decryption

Client

82.53

122.97

22.45

6. Translation

Client

303.26

0.93

0.72

7. Cumulative usage

Client/server

779.68/26.46

122.97/108.13

22.45/22.45