From: PolyHaplotyper: haplotyping in polyploids based on bi-allelic marker dosage data
PolyHaplotyper | SATlotyper | Happy-inf | |
---|---|---|---|
Nr of haploblocks | 60 | 60 | 60 |
Mean nr of haplotypes inferred | 13.7 | 12.9 | 31.8 |
Mean true nr of haplotypes | 13.9 | 13.9 | 13.9 |
Mean % haplotyped | 89.6 | 100.0 | 100.0 |
Mean % correct (of all haplotyped) | 98.7 | 42.4 | 33.4 |
Total nr correct | 24,402 | 11,700 | 9220 |
Total nr incorrect | 316 | 15,900 | 18,380 |
Total nr not haplotyped | 2882 | 0 | 0 |
Run time (s) | 5898 | 7024 | 1166 |