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Fig. 2 | BMC Bioinformatics

Fig. 2

From: Prediction of polyreactive and nonspecific single-chain fragment variables through structural biochemical features and protein language-based descriptors

Fig. 2

Performance metrics of the models in this work. A ROC plots for the best models from the combinations of descriptors and algorithms. The ‘OneHot-CDRS’ and ‘3MERS-CDRS’ are the reported models by Harvey et al. (ref. 26) for nanobody and we used them as baselines. The ‘Rg’ is the anhydrous radius of gyration and the best single factor in this work. The best models were trained with the optimal hyperparameter after grid search. The AUC metric was measured in the test set. B Boxplot plot for the relative comparison rank of descriptors and algorithms. We put all the models together and ranked the descriptors and algorithms by the AUC metric in the test set

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BMC Bioinformatics

ISSN: 1471-2105

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