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Table 1 The mean and standard errors (in brackets) of modified false discovery rate (mFDR) over 30 replications for Grace-AKO versus Grace model with a pre-specified mFDR level at 0.1

From: Grace-AKO: a novel and stable knockoff filter for variable selection incorporating gene network structures

p

\(n = 100\)

\(n = 200\)

\(n = 300\)

Grace-AKO

Grace

Grace-AKO

Grace

Grace-AKO

Grace

10

0.01 (0.018)

0.15 (0.032)

0.03 (0.032)

0.22 (0.049)

0.03 (0.025)

0.26 (0.053)

20

0.02 (0.027)

0.26 (0.045)

0.02 (0.023)

0.37 (0.045)

0.03 (0.040)

0.43 (0.010)

40

0.03 (0.030)

0.24 (0.062)

0.04 (0.030)

0.48 (0.040)

0.06 (0.047)

0.61 (0.030)

60

0.04 (0.026)

0.40 (0.053)

0.03 (0.026)

0.55 (0.032)

0.06 (0.034)

0.67 (0.018)