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Table 1 Dataset characteristics

From: INFLECT: an R-package for cytometry cluster evaluation using marker modality

Dataset

Type of samples

Number of cells

Number of labeled cells

Clustering method

Number of labels

Number of markers used in clustering

Levine32 [10]

BMMCa

161,443

104,184

Phenograph

14

32

Bagwell [26]

PBMCb

101,963

901,559

Manual gating

26

29

KimmeyBM [25]

BMMC

994,897

994,897

SPADEc

33

32

KimmeyPBMC [25]

PBMC

795,428

795,428

SPADE

9

12

  1. aBone marrow mononuclear cells
  2. bPeripheral blood mononuclear cells
  3. cSpanning-tree progression analysis of density-normalized events