Skip to main content

Table 2 Neighborhoods obtained for the protein TP53 (uniprotkb:P04637) at different values of x, w.r.t. the Intact reliability scores

From: DIAMIN: a software library for the distributed analysis of large-scale molecular interaction networks

x

Neighborhood

0.70

AKT1, APEX1,ARRB2,ATRX,BAD,BAK1,BAX,BBC3,BCL2L11,BHLHE40,BID,

BRD7,BRI1,CCAR2,CCND1,CDK2,CDKN2A,COP1,CREBBP,CSNK2A1,CUL7,

CUL9,Crebbp,DAPK1,DAXX,DLG1,DNMT1,DVL2,E6,EBNA1,EEF1A1,EGFR,

EP300,FYN,GTF2H1,H4-16,H4C1,H4C11,H4C12,H4C13,H4C14,H4C15,H4C2,

H4C3,H4C4,H4C5,H4C6,H4C8,H4C9,HDAC1,HGS,HIF1A,HIPK2,HMGB1,

HNRNPUL1,HSPA9,HTRA1,HTRA4,HTT,ICP0,IKBKB,IKBKG,IRF3,L,LCK,

LRRK2,Lrrk2,MAGEA2,MAGEA2B,MAP3K5,MDM2,MDM4,MKRN3,MYH9,

NCL,NME1,PARP1,PBK,PCNA,PIN1,PLK1,PML,POLA1,PPP1CA,PPP1CC,

PPP1R13L,PSMD4,PTK2,Ptk2,RAD23A,RANGAP1,RB1,RBCK1,RCHY1,

RELA,RIPK3,RNF31,RPL11,RPS19BP1,RPS7,S100A4,S100B,SERK1,SETD7,

SHARPIN,SIRT1,SMYD2,SQSTM1,STAM,SUMO1,Sirt1,TBP,TFB1,TOP1,

TP53BP1,TP53BP2,TPT1,TRAF6,TWIST1,Tp53,UBC,UBE2D2,UBE2I,

UBE3A,USP7,VRK1,WRN,Wasl,abrB,cph1,degP,kaiC,kinA

0.75

AKT1,BAK1,BAX,BBC3,BCL2L11,BID,CDKN2A,CREBBP,Crebbp,DAPK1,

DAXX,DVL2,E6,EBNA1,EGFR,EP300,HGS,HIF1A,HSPA9,HTRA1,IKBKB,

IKBKG,IRF3,LRRK2,MAP3K5,MDM2,MDM4,MKRN3,MYH9,NME1,PARP1,

PCNA,PIN1,PPP1CA,PPP1CC,PPP1R13L,PSMD4,PTK2,RAD23A,RB1,RCHY1,

RPL11,S100A4,SETD7,SIRT1,SMYD2,SQSTM1,Sirt1,TBP,TP53BP1,TP53BP2,

TWIST1,Tp53,UBC,UBE2D2,UBE3A,USP7,VRK1,cph1,degP,kaiC,kinA

0.80

AKT1,BAK1,BAX,BCL2L11,CDKN2A,CREBBP,Crebbp,DAXX,E6,EGFR,EP300,

HGS,HIF1A,HSPA9,IKBKB,IKBKG,IRF3,LRRK2,MDM2,MDM4,NME1,PIN1,

PPP1R13L,PSMD4,RAD23A,RB1,RCHY1,RPL11,S100A4,SETD7,SIRT1,SMYD2,

SQSTM1,TP53BP1,TP53BP2,TWIST1,Tp53,UBC,UBE2D2,USP7,cph1,degP

0.85

BAX,CREBBP,Crebbp,DAXX,EGFR,EP300,HIF1A,IKBKB,IRF3,LRRK2,MDM2,

MDM4,NME1,PIN1,RB1,RCHY1,RPL11,S100A4,SETD7,SIRT1,TP53BP2,Tp53,

UBC,USP7,cph1,degP