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Fig. 3 | BMC Bioinformatics

Fig. 3

From: C3NA: correlation and consensus-based cross-taxonomy network analysis for compositional microbial data

Fig. 3

Shiny application for two conditions comparison. 1. Shiny panel navigation, including the ‘Compare Two Conditions’ and ‘Download Panel’. 2. Condition-based information from the two conditions, including shared and different taxa from various taxonomic levels. 3. Module-based taxa comparison between the two conditions. 4. Module preservation investigation, the left plot shows the Median Rank Vs. Z Summary with the node size reflects the number of taxa in the respective module. The right plot is an interactive table from reacting to the click of the module preservation plot. 5. Taxa selector for the interactive display in Panels 6–8. The user can select multiple taxa from the left columns (including all significant taxa from both conditions). To remove a selected taxon, the user can click the taxon from the right column. 6. Bar plot for the taxa membership among the modules from either condition. The user can switch between viewing all taxa or the selected taxa from the ‘Taxa Selector’. For better display, the bar plot will only display the select taxon and its children’s taxonomic level taxa. Please click on the left filter icon to view plot-based options. 7. Network plot based on the selected taxa. Multiple options are available from the top left filter icon. 8. Single and sequentially clicked taxa and their respective log2-transformed count from both conditions. Note: the font size in the image has been adjusted for this publication

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