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Table 7 Runtimes on homogeneous and heterogeneous HPC clusters

From: Profiling the BLAST bioinformatics application for load balancing on high-performance computing clusters

Test case

Node type II

Node type V

(D/m,Q/n)

Time (s)

(D/m,Q/n)

Time (s)

\(\times\) # nodes

\({\mathbf{ \times }}\) # nodes

1

(8179,1142220)

204.15

\(\times\) 4,096

2

(261725,35695)

37.79

\(\times\) 4,096

3

(261725,35695)

58.52

(261725,35695)

37.79

\(\times\) 2,048

\(\times\) 2,048

4

(523449,13000)

46.89

(523449,22695)

46.97

\(\times\) 2,048

\(\times\) 2,048