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Fig. 7 | BMC Bioinformatics

Fig. 7

From: srnaMapper: an optimal mapping tool for sRNA-Seq reads

Fig. 7

Number of errors or unmapped nucleotides (in case of soft-clipping) found at the 5′ end of the reads (left panel), at the 3’ end of the reads, or located elsewhere in the reads (the “int.” panel). For a given read, with a given number of mapping errors, each hit may be aligned in its own way. For instance, a hit could have the first nucleotide unmapped, whereas another hit could have the last nucleotide unmapped. In this configuration, it is not possible to assign a sequence to a 5′ or 3′ RNA edition. These ambiguous reads are listed in the “amb.” column (right panel)

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