Table 1 Twenty exome datasets for five cancer types that were analysed in our previous work for obtaining variant information that led to formation of derivative datasets
Type of cancer | Selected sample files and NCBI SRA IDs |
|---|---|
Human diffuse type gastric cancer | SRR941051, SRR941052, SRR941053, SRR941054 |
Intrahepatic cholangiocarcinoma | SRR894452, SRR900123, SRR900099 |
High-grade serous ovarian cancer | ERR035487, ERR035488, ERR035489 |
Pancreatic adenocarcinoma | ERR232253, ERR232254, ERR232255 |
Non BRCA1/BRCA2 familial breast cancer | ERR166303, ERR166304, ERR166307, ERR166310, ERR166312, ERR166335, ERR166336 |