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Table 1 Effect of parameter β on the performance of HPN

From: Protein function annotation based on heterogeneous biological networks

 

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0.9

1

BP

           

 Recall

0.301

0.511

0.514

0.518

0.521

0.525

0.529

0.530

0.536

0.537

0.135

 Precision

0.309

0.492

0.494

0.497

0.501

0.508

0.510

0.512

0.516

0.513

0.104

 F-measure

0.305

0.501

0.504

0.507

0.511

0.516

0.519

0.521

0.526

0.525

0.118

MF

           

 Recall

0.441

0.547

0.549

0.550

0.554

0.552

0.555

0.556

0.549

0.545

0.238

 Precision

0.446

0.551

0.553

0.554

0.556

0.557

0.558

0.561

0.561

0.561

0.239

 F-measure

0.443

0.549

0.551

0.552

0.555

0.554

0.557

0.559

0.555

0.553

0.238

CC

           

 Recall

0.556

0.588

0.589

0.592

0.599

0.604

0.606

0.607

0.607

0.612

0.175

 Precision

0.551

0.576

0.579

0.584

0.590

0.593

0.592

0.595

0.596

0.598

0.181

 F-measure

0.554

0.582

0.584

0.588

0.594

0.598

0.599

0.601

0.602

0.605

0.178

  1. Bold values represent the optimal value of parameter β set in BP, MF and CC