Protein function annotation based on heterogeneous biological networks

BMC Bioinformatics

Table 2 The results of PHN and seven competing methods using ten-fold cross validation

Categories	Methods	Recall	Precision	F-measure
BP	PHN	0.523	0.504	0.513
	Song	0.335	0.323	0.329
	DCS	0.431	0.415	0.423
	DSCP	0.450	0.446	0.448
	NPF	0.470	0.475	0.472
	NC	0.678	0.259	0.374
	PON	0.175	0.192	0.183
	GrAPFI	0.289	0.306	0.297
MF	PHN	0.547	0.553	0.549
	Song	0.266	0.259	0.263
	DCS	0.522	0.519	0.520
	DSCP	0.536	0.536	0.536
	NPF	0.507	0.509	0.508
	NC	0.563	0.217	0.313
	PON	0.261	0.273	0.267
	GrAPFI	0.444	0.455	0.449
CC	PHN	0.604	0.584	0.594
	Song	0.398	0.394	0.396
	DCS	0.428	0.418	0.423
	DSCP	0.458	0.442	0.449
	NPF	0.503	0.555	0.520
	NC	0.706	0.304	0.425
	PON	0.160	0.175	0.167
	GrAPFI	0.237	0.251	0.244

ISSN: 1471-2105