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Table 1 Comparison of performances between the algorithms

From: MP4: a machine learning based classification tool for prediction and functional annotation of pathogenic proteins from metagenomic and genomic datasets

Values

PART

RF

IBk

SVM

Accuracy (%)

62.9

74.9

66.4

73.6

Precision

0.64

0.69

0.73

0.73

F-Measure

0.64

0.76

0.64

0.75

MCC

0.38

0.56

0.44

0.57

ROC

0.69

0.87

0.71

0.81

TPR

0.63

0.75

0.66

0.74

TNR

0.80

0.85

0.83

0.85

  1. MCC Matthews correlation coefficient, TPR True positive rate, TNR True negative rate
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BMC Bioinformatics

ISSN: 1471-2105

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