An improved algorithm for flux variability analysis

BMC Bioinformatics

Table 2 Comparison between the number of LPs solved with the proposed algorithm and the literature algorithm as implemented by COBRApy on some selected FVA problems

Model name	Proposed FVA algorithm LPs	COBRApy FVA LPs	Ratio
iAB_RBC_283	602	939	0.64
iAF1260b	3108	4777	0.65
iAT_PLT_636	812	2014	0.40
iEC1356_Bl21DE3	3499	5481	0.64
iEC1364_W	3525	5529	0.64
iECSP_1301	3489	5425	0.64
iIS312_Amastigote	686	1039	0.66
iJN1463	3890	5855	0.66
iJO1366	3361	5167	0.65
iLB1027_lipid	5024	8913	0.56
iLJ478	961	1305	0.73
iMM904	2120	3155	0.67
iNJ661	1477	2051	0.72
Recon3D	6082	21201	0.29

ISSN: 1471-2105