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Table 2 List of the top fifty genes with lowest p-value found between P vs. PM, regarding different gene expression analysis, subsequently used for classification analysis in each dataset tested

From: Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization

DATASET1

DATASET2

DATASET3

LRP4

CHGA

SPOCK2

AXIN2

TPH1

LGR6

MIR3197

VWA5B2

ORM1

TFF2

STXBP5L

H2BS1

RNU7-77P

EGFR

MTRNR2L12

GBP4

IDO1

NELL2

RNU6-83P

PEG3

CXCL11

IDO1

MIR3978

IDO1

RNU6-769P

NLRP2

SLCO1B1

LGR6

PTPRN

SLCO1B7

RNU6-580P

RNU6-1010P

CD8A

RNU6-196P

RIMS2

CNN1

S100A12

CPLX2

HTR1D

RNU6-1082P

LRP4

ACTG2

MIR567

MIR5003

SLC38A11

SNORD66

NELL2

ABCA12

CD8B

IGLV10-54

HLA-DRB5

KIT

RNU6-196P

ASB4

MIR6895

IGHV4-34

GBP4

WIPF3

ADGRV1

CALB1

MIR559

RET

APOL1

RNU6-1176P

CXCL11

FBXO39

BIRC3

FMN2

DES

DUOX2

GBP4

CRYAB

MIR28

SCN3A

IGHV4-34

ZPR1

CYP3A7

ITGAE

RNU6-1111P

USH2A

MIR155HG

RNU6-593P

SORCS2

TNNT2

SLC28A2

MUC16

PLAAT4

RNU6-912P

RNU6-1208P

OSR2

RNU2-69P

RNA5SP241

IGHD

RNU6-310P

MX1

DTHD1

SNORA36B

MAP6

GZMH

RNU6-223P

SHISA2

LINC02323

RNU2-24P

RNU6-122P

MGP

ATAD3C

MAP2

SLFN12L

SCARNA23

RNU6-677P

CD8B

MIR4639

CCDC158

SNORD116-14

RNU5B-1

TTLL6

KLK7

RNA5SP179

CDHR3

FABP3

RNU6-807P

SYT16

CX3CL1

RNU7-73P

KIF5C

TNNC2

TAP1

MIR7-3HG

MYL9

IGHV4-34

WIPF3

TIGIT

CD8A

CMPK2

AIM2

S100A8

RUNDC3A

THEMIS

RNU7-19P

AIRE

IFI44L

RNU7-70P

NCAM1

CD7

RNU6-767P

MIR552

LINC02446

APOL1

CAMK2B

WARS1