Table 5 Median values (and standard deviation in parenthesis) of the performance metrics in test set by regularized LR methods across 100 runs applied to the full dataset
# Genes | Acc | Miscl/FN | Sensitivity | Specificity | AUC | # Common genes | |
|---|---|---|---|---|---|---|---|
EN | |||||||
D1 | 59(32.63) | 0.67(0.093) | 6(1.667)/3(1.133) | 0.67(0.126) | 0.67(0.142) | 0.67(0.093) | 8 |
D2 | 45(21.34) | 0.59(0.102) | 7(1.732)/5(1.387) | 0.38(0.173) | 0.78(0.166) | 0.58(0.095) | 4 |
D3 | 39(19.76) | 0.59(0.074) | 7(1.257)/6(1.135) | 0.25(0.142) | 0.89(0.118) | 0.57(0.072) | 6 |
\(\bar{x}\) | 48 | 0.62 | – | 0.43 | 0.78 | 0.61 | 6 |
iTwiner | |||||||
D1 | 33(21.98) | 0.78(0.075) | 4(1.343)/4(1.362) | 0.56(0.151) | 1.00(0.036) | 0.78(0.075) | 19 |
D2 | 42(21.11) | 0.65(0.056) | 6(0.946)/6(0.904) | 0.25(0.113) | 1.00(0.040) | 0.63(0.058) | 25 |
D3 | 39(20.65) | 0.65(0.050) | 6(0.847)/6(0.783) | 0.25(0.098) | 1.00(0.040) | 0.63(0.052) | 30 |
\(\bar{x}\) | 38 | 0.69 | – | 0.35 | 1 | 0.68 | 25 |