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Table 2 MMETSP members of each simulated community with the number of orthologous groups which include each organism and the assessed BUSCO completeness of each transcriptome

From: Reverse engineering environmental metatranscriptomes clarifies best practices for eukaryotic assembly

MMETSP Group

MMETSP ID

Organism

BUSCO Completeness

Number of Orthologous Groups

A

MMETSP0027

Skeletonema marinoi

146/255

17057

A

MMETSP0147

Chrysochromulina polylepis

119/255

8185

A

MMETSP0448

Heterocapsa triquestra

124/255

14377

A

MMETSP0562

Skeletonema dohrnii

134/255

10279

A

MMETSP0604

Skeletonema menzelii

161/255

9599

A

MMETSP0918

Skeletonema marinoi

135/255

9871

A

MMETSP0971

Thalassiosira oceanica

152/255

11115

A

MMETSP0994

Emiliania huxleyi

113/255

12435

A

MMETSP0995

Emiliania huxleyi

99/255

12415

A

MMETSP1403

Micromonas pusilla

. 137/255

3779

A

MMETSP1405

Thalassiosira weissflogii

151/255

8800

A

MMETSP1428

Skeletonema marinoi

152/255

10152

B

MMETSP0321

Leptocylindrus danicus

169/255

8235

B

MMETSP0369

Scrippsiella hangoei-like

155/255

20932

B

MMETSP0397

Cyclophora tenuis

83/255

7306

B

MMETSP0469

Oxyrrhis marina

160/255

9456

B

MMETSP0800

Striatella unipunctata

100/255

8288

B

MMETSP0884

Pelagococcus subviridis

112/255

7134

B

MMETSP0896

Heterosigma akashiwo

62/255

3988

B

MMETSP0975

Pelagomonadales sp.

171/255

9100

B

MMETSP1117

Symbiodinium sp.

129/255

14718

B

MMETSP1338

Pelagodinium sp.

141/255

17307

B

MMETSP1349

Aplanochytrium stocchinoi

75/255

3747

B

MMETSP1411

Thalassiosira weissflogii

144/255

6939

  1. BUSCO completeness is a metric for the quality of the transcriptome based on the presence of shared ancestral eukaryotic genes (of a total of 255 evaluated genes). Reported orthologous groups are based on OrthoFinder [59] analysis on all community members for each MMETSP group; the total number of reported orthogroups was 42,093 for MMETSP group A and 44178 for MMETSP group B