MultiScale-CNN-4mCPred: a multi-scale CNN and adaptive embedding-based method for mouse genome DNA N4-methylcytosine prediction

Table 8 Comparison with DeepTorrent and 4mCPred over six species

Method	Species	Sn	Sp	Acc	MCC
MultiScale-CNN-4mCPred	A. thaliana	0.7792	0.8440	0.8116	0.6245
	C. elegans	0.8467	0.8987	0.8727	0.7463
	D. melanogaster	0.9060	0.8850	0.8955	0.7912
	E. coli	0.8358	0.8731	0.8545	0.7094
	G. pickeringii	0.7150	0.8000	0.7575	0.5169
	G. subterraneus	0.7457	0.8400	0.7929	0.5883
DeepTorrent*	A. thaliana	0.8182	0.7803	0.7992	0.5989
	C. elegans	0.9038	0.8077	0.8558	0.7149
	D. melanogaster	0.8898	0.8220	0.8559	0.7135
	E. coli	0.9231	0.8462	0.8846	0.7715
	G. pickeringii	0.8684	0.9474	0.9079	0.8183
	G. subterraneus	0.8333	0.9167	0.8750	0.7526
4mCPred*	A. thaliana	0.7652	0.7652	0.7652	0.5300
	C. elegans	0.8558	0.7885	0.8221	0.6500
	D. melanogaster	0.8390	0.8136	0.8263	0.6500
	E. coli	0.8462	0.8077	0.8269	0.6500
	G. pickeringii	0.8684	0.6842	0.7763	0.5600
	G. subterraneus	0.9167	0.7500	0.8333	0.6800

*Result came from the reference [26, 44], and the bold highlighted the best values in the corresponding species

ISSN: 1471-2105