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Table 4 Results from ablation study for ER

From: MSLP: mRNA subcellular localization predictor based on machine learning techniques

ER (1185)

Metric

GNB

DT

RF

XGB

CatB

SVC

Kmer

Sen

61.60

68.80

79.30

83.10

83.10

87.30

Spe

70.60

62.60

80.70

80.70

83.60

82.80

ACC

66.10

65.70

80.00

81.90

83.40

85.10

Pre

70.60

62.60

80.70

80.70

83.60

82.80

F1

66.00

65.70

80.00

81.90

83.40

85.00

MCC

0.323

0.314

0.6

0.638

0.667

0.702

PseKNC

Sen

59.10

65.80

79.70

86.90

85.20

87.80

Spe

73.10

67.20

84.90

79.00

84.50

82.80

ACC

66.10

66.50

82.30

82.90

84.80

85.30

Pre

73.10

67.20

84.90

79.00

84.50

82.80

F1

65.90

66.50

82.30

82.90

84.80

85.30

MCC

0.325

0.331

0.647

0.661

0.697

0.706

Physiochemical

Sen

56.50

66.70

77.60

80.20

81.40

83.10

Spe

73.90

67.20

77.30

80.30

79.00

71.40

ACC

65.30

66.90

77.50

80.20

80.20

77.30

Pre

73.90

67.20

77.30

80.30

79.00

71.40

F1

65.00

66.90

77.50

80.20

80.20

77.20

MCC

0.31

0.339

0.549

0.604

0.604

0.549

Z-curve

Sen

58.60

64.60

75.10

81.90

81.90

85.20

Spe

70.20

65.10

81.90

76.10

80.30

76.10

ACC

64.40

64.80

78.50

78.90

81.10

80.60

Pre

70.20

65.10

81.90

76.10

80.30

76.10

F1

64.30

64.80

78.50

78.90

81.10

80.60

MCC

0.29

0.297

0.572

0.58

0.621

0.615

All features

Sen

58.20

73.00

79.70

85.70

86.50

77.20

Spe

73.10

71.00

78.20

78.60

80.70

71.40

ACC

65.70

72.00

78.90

82.10

83.60

74.30

Pre

73.10

71.00

78.20

78.60

80.70

71.40

F1

65.50

72.00

78.90

82.10

83.60

74.30

MCC

0.317

0.44

0.579

0.644

0.673

0.487