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Table 3 Performance evaluation results based on the RNAStralign benchmark with the redundant sequences removed

From: REDfold: accurate RNA secondary structure prediction using residual encoder-decoder network

 

ACC

SEN

PPV

F-Score

Log\(_{10}\)(Time)

REDfold

0.895

0.905

0.906

0.906

2.126

RNAfold

0.496

0.617

0.540

0.576

1.763

RNAstructure

0.494

0.607

0.539

0.571

3.089

Probknot

0.510

0.616

0.553

0.583

3.427

CONTRAfold

0.569

0.663

0.601

0.631

2.555

SPOTRNA

0.648

0.628

0.705

0.664

4.650

Ufold

0.835

0.862

0.844

0.853

4.038

E2Efold

0.477

0.343

0.545

0.421

3.805

MXfold2

0.701

0.747

0.723

0.735

3.204

  1. Top-performing items are emphasized with bold font
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BMC Bioinformatics

ISSN: 1471-2105

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