From: AttSec: protein secondary structure prediction by capturing local patterns from attention map
Model | TEST2018 | SPOT-2016 | SPOT-2016-HQ | SPOT-2018 | SPOT-2018-HQ |
---|---|---|---|---|---|
PSIPRED-Single | – | – | – | – | – |
SPIDER3-Single | 59.8 | 58.9 | 59.9 | 57.4 | 58.0 |
ProteinUnet | 60.3 | – | – | - | – |
SPOT-1D-Single | 62.2 | 61.4 | 61.6 | 60.1 | 60.0 |
SPOT-1D (profile) | 75.4 | 69.3 | 71.7 | 67.4 | 70.5 |
AttSec(ours) | 77.4 | 70.4 | 73.0 | 71.2 | 72.3 |
SPOT-1D-Single (less than 1024) | 65.5 | 64.1 | 65.8 | 64.6 | 64.8 |
SPOT-1D-LMÂ (less than 1024) | 77.5 | 70.0 | 72.6 | 70.9 | 72.3 |
AttSec(ours)Â (less than 1024) | 77.4 | 70.5 | 73.0 | 71.4 | 72.4 |