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Table 1 Overview of the hyperlinked data sources

From: Empowering biologists to decode omics data: the Genekitr R package and web server

Attribute

Source

Website

EntrezID

Entrez gene

https://www.ncbi.nlm.nih.gov/gene

Ensembl

Ensembl

http://www.ensembl.org/id

UCSC

(human and mouse)

UCSC genome browser

https://genome.ucsc.edu/cgi-bin/hgTracks

Sequence

(human and mouse)

UCSC sequence

http://genome.ucsc.edu/cgi-bin/das/dsn

Mirbase_ID

MicroRNA database

https://www.mirbase.org

HGNC_ID

HUGO Gene Nomenclature Committee

https://www.genenames.org

OMIM

Online Mendelian Inheritance in Man

https://www.omim.org

MGI_ID

Mouse genome informatics

http://www.informatics.jax.org

IMPC_ID

International Mouse Phenotyping Consortium

https://www.mousephenotype.org