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Volume 12 Supplement 1

Selected articles from the Ninth Asia Pacific Bioinformatics Conference (APBC 2011)

Research

Edited by Yi-Ping Phoebe Chen and Kwang-Hyun Cho

The Ninth Asia Pacific Bioinformatics Conference (APBC 2011). Go to conference site.

Inchon, Korea11-14 January 2011

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  1. To understand the gene regulatory system that governs the self-renewal and pluripotency of embryonic stem cells (ESCs) is an important step for promoting regenerative medicine. In it, the role of several core ...

    Authors: Sung-Joon Park and Kenta Nakai
    Citation: BMC Bioinformatics 2011 12(Suppl 1):S50
  2. Although many biological databases are applying semantic web technologies, meaningful biological hypothesis testing cannot be easily achieved. Database-driven high throughput genomic hypothesis testing require...

    Authors: Young Soo Song, Chan Hee Park, Hee-Joon Chung, Hyunjung Shin, Jihun Kim and Ju Han Kim
    Citation: BMC Bioinformatics 2011 12(Suppl 1):S51
  3. High-throughput short read sequencing is revolutionizing genomics and systems biology research by enabling cost-effective deep coverage sequencing of genomes and transcriptomes. Error detection and correction ...

    Authors: Xiao Yang, Srinivas Aluru and Karin S Dorman
    Citation: BMC Bioinformatics 2011 12(Suppl 1):S52
  4. Recent technology advances have enabled sequencing of individual genomes, promising to revolutionize biomedical research. However, deep sequencing remains more expensive than microarrays for performing whole-g...

    Authors: Jorge Duitama, Justin Kennedy, Sanjiv Dinakar, Yözen Hernández, Yufeng Wu and Ion I Măndoiu
    Citation: BMC Bioinformatics 2011 12(Suppl 1):S53
  5. Native structures of proteins are formed essentially due to the combining effects of local and distant (in the sense of sequence) interactions among residues. These interaction information are, explicitly or i...

    Authors: Mingfu Shao, Sheng Wang, Chao Wang, Xiongying Yuan, Shuai Cheng Li, Weimou Zheng and Dongbo Bu
    Citation: BMC Bioinformatics 2011 12(Suppl 1):S54
  6. Given n strings s1, …, s n each of length ℓ and a nonnegative integer d, the CLOSEST STRING problem asks to find a center string s such that none of the input strings has Ha...

    Authors: Christina Boucher and Bin Ma
    Citation: BMC Bioinformatics 2011 12(Suppl 1):S55

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