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Volume 18 Supplement 16

16th International Conference on Bioinformatics (InCoB 2017): Bioinformatics

Research

Publication of this supplement has not been supported by sponsorship. Information about the source of funding for publication charges can be found in the individual articles. The articles have undergone the journal's standard peer review process for supplements. The Supplement Editors declare that they have no competing interests.

Shenzhen, China20-22 September 2017

Edited by Christian Schönbach, Muhammad Farhan Sjaugi, and Shoba Ranganathan.

Related articles has been published as a supplement to BMC Medical Genomics, BMC Genomics and BMC Systems Biology

  1. Plankton, including phytoplankton and zooplankton, are the main source of food for organisms in the ocean and form the base of marine food chain. As the fundamental components of marine ecosystems, plankton is...

    Authors: Haiyong Zheng, Ruchen Wang, Zhibin Yu, Nan Wang, Zhaorui Gu and Bing Zheng
    Citation: BMC Bioinformatics 2017 18(Suppl 16):570
    Content type: Research Published on:

  2. (-)-Balanol is an ATP mimic that inhibits protein kinase C (PKC) isozymes and cAMP-dependent protein kinase (PKA) with limited selectivity. While PKA is a tumour promoter, PKC isozymes act as tumour promoters ...

    Authors: Ari Hardianto, Muhammad Yusuf, Fei Liu and Shoba Ranganathan
    Citation: BMC Bioinformatics 2017 18(Suppl 16):572
    Content type: Research Published on:

  3. RNA molecules have been known to play a variety of significant roles in cells. In principle, the functions of RNAs are largely determined by their three-dimensional (3D) structures. As more and more RNA 3D str...

    Authors: Ching-Yu Yen, Jian-Cheng Lin, Kun-Tze Chen and Chin Lung Lu
    Citation: BMC Bioinformatics 2017 18(Suppl 16):574
    Content type: Research Published on:

  4. Viruses of the flaviviridae family are responsible for some of the major infectious viral diseases around the world and there is an urgent need for drug development for these diseases. Most of the virtual screeni...

    Authors: Nikhil Pathak, Mei-Ling Lai, Wen-Yu Chen, Betty-Wu Hsieh, Guann-Yi Yu and Jinn-Moon Yang
    Citation: BMC Bioinformatics 2017 18(Suppl 16):548
    Content type: Research Published on:

  6. The Gene Ontology (GO) is a community-based bioinformatics resource that employs ontologies to represent biological knowledge and describes information about gene and gene product function. GO includes three i...

    Authors: Jiajie Peng, Honggang Wang, Junya Lu, Weiwei Hui, Yadong Wang and Xuequn Shang
    Citation: BMC Bioinformatics 2017 18(Suppl 16):573
    Content type: Research Published on:

  7. The identification of target molecules is important for understanding the mechanism of “target deconvolution” in phenotypic screening and “polypharmacology” of drugs. Because conventional methods of identifyin...

    Authors: Kyoungyeul Lee, Minho Lee and Dongsup Kim
    Citation: BMC Bioinformatics 2017 18(Suppl 16):567
    Content type: Research Published on:

  8. Human papillomavirus infection is a global social burden that, every year, leads to thousands new diagnosis of cancer. The introduction of a protocol of immunization, with Gardasil and Cervarix vaccines, has r...

    Authors: Marzio Pennisi, Giulia Russo, Silvia Ravalli and Francesco Pappalardo
    Citation: BMC Bioinformatics 2017 18(Suppl 16):544
    Content type: Research Published on:

  9. Drug-drug interaction extraction (DDI) needs assistance from automated methods to address the explosively increasing biomedical texts. In recent years, deep neural network based models have been developed to a...

    Authors: Wei Wang, Xi Yang, Canqun Yang, Xiaowei Guo, Xiang Zhang and Chengkun Wu
    Citation: BMC Bioinformatics 2017 18(Suppl 16):578
    Content type: Research Published on:

  10. Differential co-expression (DCX) signifies change in degree of co-expression of a set of genes among different biological conditions. It has been used to identify differential co-expression networks or interac...

    Authors: Herty Liany, Jagath C. Rajapakse and R. Krishna Murthy Karuturi
    Citation: BMC Bioinformatics 2017 18(Suppl 16):576
    Content type: Research Published on:

  11. Common spatial pattern (CSP) has been an effective technique for feature extraction in electroencephalography (EEG) based brain computer interfaces (BCIs). However, motor imagery EEG signal feature extraction ...

    Authors: Shiu Kumar, Alok Sharma and Tatsuhiko Tsunoda
    Citation: BMC Bioinformatics 2017 18(Suppl 16):545
    Content type: Research Published on:

  12. Biological data comprises various topologies or a mixture of forms, which makes its analysis extremely complicated. With this data increasing in a daily basis, the design and development of efficient and accur...

    Authors: Alok Sharma, Yosvany López and Tatsuhiko Tsunoda
    Citation: BMC Bioinformatics 2017 18(Suppl 16):546
    Content type: Research Published on:

  13. Cell division (mitosis) results in the equal segregation of chromosomes between two daughter cells. The mitotic spindle plays a pivotal role in chromosome alignment and segregation during metaphase and anaphas...

    Authors: Matloob Khushi, Imraan M. Dean, Erdahl T. Teber, Megan Chircop, Jonathan W. Arthur and Neftali Flores-Rodriguez
    Citation: BMC Bioinformatics 2017 18(Suppl 16):566
    Content type: Research Published on:

  14. In metagenomics, the separation of nucleotide sequences belonging to an individual or closely matched populations is termed binning. Binning helps the evaluation of underlying microbial population structure as...

    Authors: Damayanthi Herath, Sen-Lin Tang, Kshitij Tandon, David Ackland and Saman Kumara Halgamuge
    Citation: BMC Bioinformatics 2017 18(Suppl 16):571
    Content type: Research Published on:

  16. In recent years, biological interaction networks have become the basis of some essential study and achieved success in many applications. Some typical networks such as protein-protein interaction networks have...

    Authors: Zhen Tian, Maozu Guo, Chunyu Wang, Xiaoyan Liu and Shiming Wang
    Citation: BMC Bioinformatics 2017 18(Suppl 16):550
    Content type: Research Published on:

  19. The β-Lactamase (BL) enzyme family is an important class of enzymes that plays a key role in bacterial resistance to antibiotics. As the newly identified number of BL enzymes is increasing daily, it is imperat...

    Authors: Clarence White, Hamid D. Ismail, Hiroto Saigo and Dukka B. KC
    Citation: BMC Bioinformatics 2017 18(Suppl 16):577
    Content type: Research Published on:

  20. The dramatic development of DNA sequencing technology is generating real big data, craving for more storage and bandwidth. To speed up data sharing and bring data to computing resource faster and cheaper, it i...

    Authors: Yuting Xing, Gen Li, Zhenguo Wang, Bolun Feng, Zhuo Song and Chengkun Wu
    Citation: BMC Bioinformatics 2017 18(Suppl 16):549
    Content type: Research Published on:

  21. In current statistical methods for calling differentially expressed genes in RNA-Seq experiments, the assumption is that an adjusted observed gene count represents an unknown true gene count. This adjustment u...

    Authors: Joel Z. B. Low, Tsung Fei Khang and Martti T. Tammi
    Citation: BMC Bioinformatics 2017 18(Suppl 16):575
    Content type: Research Published on:

  22. Pathogen detection in clinical samples based on 16S metagenomic sequencing technology in microbiology laboratories is an important strategy for clinical diagnosis, public health surveillance, and investigation...

    Authors: Jiaojiao Miao, Na Han, Yujun Qiang, Tingting Zhang, Xiuwen Li and Wen Zhang
    Citation: BMC Bioinformatics 2017 18(Suppl 16):568
    Content type: Research Published on:
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