Figure 2
From: GLIDERS - A web-based search engine for genome-wide linkage disequilibrium between HapMap SNPs
GLIDERS results page. The top of the page displays the HapMap phase, build, and population queried, as well as any user specified query restrictions. Below the query information are the results, with the results for each query SNP in its own table. The first SNP in each table is the query SNP, followed by all the SNPs in the genome that meet the search criteria. The information displayed for each SNP includes the chromosome, base pair position, MAF, distance from query SNP, r2 with query SNP, D' with query SNP, chi-squared statistic and p-value (Bonferroni corrected and uncorrected), and information about its membership on selected commercial arrays. Additional information on each SNP can be obtained by clicking the SNP name which takes the user to the dbSNP record for that SNP. The results page also informs users if any query SNP failed the QC criteria, is not a SNP in HapMap, or whether no SNPs met the specified search criteria. The user is also provided with a link at the top and bottom of the page to download a tab-delimited text file of the results.