Figure 6
From: Exploratory visual analysis of conserved domains on multiple sequence alignments
MSAVis viewing a subset of the alignment. Subsequences over the proteins can be zoomed in order to investigate potential causes for the alignment or positions of the conserved domains. At certain zoom level, the individual amino acids for a protein are displayed. In this example, we can see that the dissimilarity in alignment leads to a gap in DNA_methylase over several species. The expectation value displayed is provided by the CDD.